James Gleeson, Dept. of Mathematics and Statistics, University of Limerick.

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Complete list of publications:

Journal papers

1. Durrett R, Gleeson JP, Lloyd AL, Mucha PJ, Shi F, Sivakoff D, Socolar J and Varghese C,

Graph fission in an evolving voter model,

PNAS, to appear.

2. Gleeson JP, Melnik S, Ward J, Porter MA, Mucha PJ,

Accuracy of mean-field theory for dynamics on real-world networks,

Phys. Rev. E, 85, 026106 (2012); arXiv:1011.3710

3. Hurd TR and Gleeson JP,

A framework for analyzing contagion in banking networks,

submitted; arXiv:1110.4312

4. Cellai D, Lawlor A, Dawson KA, Gleeson JP,

Tricritical point in heterogeneous k-core percolation,

Phys. Rev. Letters, 107, 175703 (2011); arXiv:1106.1565

5. Gleeson JP,

High-accuracy approximation of binary-state dynamics on networks,

Phys. Rev. Letters, 107, 068701 (2011); extended version: arXiv:1104.1537.

6. Hackett A, Gleeson JP, Melnik S

Site percolation in clustered random networks,

Int. J. Complex Systems in Science, 1, 25-32 (2011).

7. Gleeson JP, Hurd TR, Melnik S, Hackett A,

Systemic risk in banking networks without Monte Carlo simulation,

submitted; PDF.

8. Hackett A, Melnik S, Gleeson JP,

Cascades on a class of clustered random networks, Phys. Rev. E, 83, 056107 (2011); arXiv:1012.3651

9. Melnik S, Hackett A, Porter MA, Mucha PJ, Gleeson JP,

The unreasonable effectiveness of tree-based theory for networks with clustering, Phys. Rev. E, 83, 036112 (2011); arXiv:1001.1439

10. Gleeson JP, Melnik S, Hackett A,

How clustering affects the bond percolation threshold in complex networks, PHYSICAL REVIEW E, 81, Art. No. 066114 (2010); arXiv:0912.4204 ) [Selected to appear in the Virtual Journal of Biological Physics Research (Jun 18, 2010 issue)]

11. Tertinek S, Gleeson JP, and Feely O,

Binary phase detector gain in bang-bang phase-locked loops with DCO jitter,

IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS II, 57, 941 (2010).

12. Jabłońska M, Mayrhofer A, Gleeson JP,

Stochastic simulation of the uplift process for the Irish electricity market,

MATHEMATICS IN INDUSTRY CASE STUDIES JOURNAL, 2, 88-110 (2010).

13. Gallagher DA, Gleeson JP, Kenyon CM, and Lichters R,

Valuation of a cashflow CDO without Monte Carlo simulation, submitted. [SSRN]

14. Tertinek S, Gleeson JP, and Feely O,

Statistical analysis of first-order bang-bang phase-locked loops using sign-dependent random walk theory,

IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I, 57 (9), 2367-2380 (2010).

15. Gleeson JP,

Bond percolation on a class of clustered random networks,

PHYSICAL REVIEW E, 80, Art. No. 036107, arXiv:0904.4292 (2009) [Selected to appear in the Virtual Journal of Biological Physics Research (Sep 15, 2009 issue)]

16. Fitzgerald T, Farrell R, Petkov N, Bolger C, Shaw M, Charpin J, Gleeson JP, Holmes J, and Morris M,

A study on the combined effects of solvent evaporation and polymer flow upon block copolymer self-assembly and alignment on topographic patterns, LANGMUIR, 25, 13551-13560 (2009). [ACS]

17. Khoury M, Gleeson JP, Sancho JM, Lacasta AM, and Lindenberg K,

Diffusion coefficient in periodic and random potentials,

PHYSICAL REVIEW E, 80, 021123 (2009). [PRE]

18. Gleeson JP and Melnik S

Analytical results for bond percolation and k-core sizes on clustered networks

PHYSICAL REVIEW E, 80, Art. No. 046121 (2009); arXiv 0811.4511

19. Gleeson JP

Transport in randomly-fluctuating spatially-periodic potentials

PHYSICA A, 388, 277-287 (2009) [arXiv]

20. Gleeson JP

Cascades on correlated and modular random networks

PHYSICAL REVIEW E, 77, Art. No. 046117 (2008); [PDF] [Selected to appear in the Virtual Journal of Biological Physics Research (May 1, 2008 issue)]

21. Gleeson JP

Mean size of avalanches on directed random networks with arbitrary degree distributions

PHYSICAL REVIEW E, 77, Art. No. 057101 (2008) [PDF]

22. Gleeson TG, Moriarty J, Shortt CP, et al.

Accuracy of whole-body low-dose multidetector CT (WBLDCT) versus skeletal survey in the detection of myelomatous lesions, and correlation of disease distribution with whole-body MRI (WBMRI)

SKELETAL RADIOL, 38, 225-236 (2008). [PUBMED]

23. Appleby JAD, Gleeson JP and Rodkina A

On asymptotic stability and instability with respect to a fading stochastic perturbation

APPLICABLE ANALYSIS, 88, 579-603 (2009).

24. Appleby JAD, Gleeson JP and Rodkina A

Asymptotic constancy and stability in nonautonomous stochastic differential equations

CUBO, 10, 145-159 (2008).

25. Goulding D, Melnik S, Curtin D, et al.

Kramers’ law for a bistable system with time-delayed noise

PHYSICAL REVIEW E, 76, Art. No. 031128 (2007) [PDF]

26. Gleeson JP, Cahalane DJ

Seed size strongly affects cascades on random networks

PHYSICAL REVIEW E, 75, Art. No. 056103 (2007) [PDF]

27. Lanyon YH, De Marzi G, Watson YE, et al.

Fabrication of nanopore array electrodes by focused ion beam milling,

ANALYTICAL CHEMISTRY, 79, 3048-3055 (2007) [PDF]

28. Cronin K, Mackey D, Cregan V, et al.

Selection of processing temperature to minimize product temperature variability in food heating processes

FOOD AND BIOPRODUCTS PROCESSING, 85, 344-353 (2007).

29. O’Doherty F, Gleeson JP

Phase diffusion coefficient for oscillators perturbed by colored noise,

IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS II-EXPRESS BRIEFS 54, 435-439 (2007). [PDF]

30. Gleeson JP, O’Doherty F

Non-Lorentzian spectral lineshapes near a Hopf bifurcation

SIAM JOURNAL ON APPLIED MATHEMATICS, 66 (5): 1669-1688 2006 [PDF]

31. Retkute R, Gleeson JP
Role of interaction on noise-induced transport of two coupled particles in Brownian ratchet devices
FLUCTUATION AND NOISE LETTERS 6 (3): L263-L277 SEP 2006 [PDF]

32. Braun RJ, Wilson RA, Pelesko JA, et al.
Applications of small-world network theory in alcohol epidemiology
JOURNAL OF STUDIES ON ALCOHOL 67 (4): 591-599 JUL 2006 [Word]

33. Gleeson JP, Sancho JM, Lacasta AM, et al.
Analytical approach to sorting in periodic and random potentials
PHYSICAL REVIEW E 73 (4): Art. No. 041102 Part 1 APR 2006 [PDF]

34. Gleeson JP
Phase diffusion due to low-frequency colored noise
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS II-EXPRESS BRIEFS 53 (3): 183-186 MAR 2006 [PDF]

35. Gleeson JP
The mean field of weakly coupled oscillators exhibits non-smooth phase noise
EUROPHYSICS LETTERS 73 (3): 328-334 FEB 2006 [PDF]

36. Swain RS, Gleeson JP, Kennedy MP
Influence of noise intensity on the spectrum of an oscillator
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS II-EXPRESS BRIEFS 52 (11): 789-793 NOV 2005 [PDF]

37. Gleeson JP
Transient micromixing: Examples of laminar and chaotic stirring
PHYSICS OF FLUIDS 17 (10): Art. No. 100614 OCT 2005 [PDF]

38. Gleeson JP
Exactly solvable model of continuous stationary 1/f noise
PHYSICAL REVIEW E 72 (1): Art. No. 011106 Part 1 JUL 2005 [PDF]

39. Cox EA, Gleeson JP, Mortell MP
Nonlinear sloshing and passage through resonance in a shallow water tank
ZEITSCHRIFT FUR ANGEWANDTE MATHEMATIK UND PHYSIK 56 (4): 645-680 JUL 2005 [PDF]

40. Gleeson JP
Passive motion in dynamical disorder as a model for stock market prices
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS 351 (2-4): 523-550 JUN 15 2005 [PDF]

41. Gleeson JP, Roche OM, West J, et al.
Modelling annular micromixers
SIAM JOURNAL ON APPLIED MATHEMATICS 64 (4): 1294-1310 2004 [PDF]

42. West J, Gleeson JP, Alderman J, et al.
Structuring laminar flows using annular magnetohydrodynamic actuation
SENSORS AND ACTUATORS B-CHEMICAL 96 (1-2): 190-199 NOV 15 2003 [PDF]

43. Gleeson JP, Pullin DI
Flatness of tracer density profile produced by a point source in turbulence
PHYSICS OF FLUIDS 15 (11): 3546-3557 NOV 2003 [PDF]

44. West J, Karamata B, Lillis B, et al.
Application of magnetohydrodynamic actuation to continuous flow chemistry
LAB ON A CHIP 2 (4): 224-230 2002 [PDF]

45. Gleeson JP
Comment on "Diffusion in biased turbulence"
PHYSICAL REVIEW E 66 (3): Art. No. 038301 Part 2B SEP 2002 [PDF]

46. Gleeson JP
Electroosmotic flows with random zeta potential
JOURNAL OF COLLOID AND INTERFACE SCIENCE 249 (1): 217-226 MAY 1 2002 [PDF]

47. Gleeson JP
Exact solution for single-scale Gaussian random transport
PHYSICAL REVIEW E 65 (3): Art. No. 037103 Part 2B MAR 2002 [PDF]

48. Gelb A, Gleeson JP
Spectral viscosity for shallow water equations in spherical geometry
MONTHLY WEATHER REVIEW 129 (9): 2346-2360 2001 [PDF]

49. Gleeson JP
A closure method for random advection of a passive scalar
PHYSICS OF FLUIDS 12 (6): 1472-1484 JUN 2000 [PDF]

Book chapters

50. Cronin K and Gleeson JP

Monte Carlo simulation

Chapter 16 (pp. 501-531) of Handbook of Food and Bioprocess Modeling Techniques, S.S. Sablani et al. eds. (CRC Press), ISBN: 9780824726713, 2007.

Conference papers

51. Melnik S, Hackett A, Porter MA, Mucha PJ, Gleeson JP

The unreasonable effectiveness of tree-based theory for bond percolation on networks with clustering

Proc. European Conference on Complex Systems (ECCS ’10), Lisbon (2010) [PDF]

Winner of joint second prize in ECCS’10 Best Papers awards, see www.eccs2010.eu/bestpaperawards

52. Hackett A, Gleeson JP, and Melnik S

Site percolation in clustered random networks

Int. J. Complex Systems in Science, 1, 25-32 (2011) [Proceedings of Net-Works 2010, Zaragoza, Spain]

53. Melnik S and Gleeson JP

Analytical approach to bond percolation on clustered networks,

Chapter 13 (pp. 147-159) of Complex Networks: Results of the 2009 International Workshop on Complex Networks (CompleNet 2009), S. Fortunato, G. Mangioni, R. Mendezes, and V. Nicosia eds., Catania, Italy, May 2009, Studies in Computational Intelligence, vol. 207 (Springer-Berlin/Heidelberg), ISBN: 978-3-642-01205-1, 2009.

54. O’Tuama C and Gleeson JP

Combined effects of frequency quantization and additive input noise in a first-order digital PLL,

Electronic Notes in Theoretical Computer Science, vol. 225, 255-268 (2009). [ScienceDirect]

55. Gleeson JP and Cahalane DJ

An analytical approach to cascades on random networks,

Proc. SPIE Vol. 6601 Noise and Stochastics in Complex Systems and Finance, J.

Kerstész, S. Bornholdt, and R.N. Mantegna eds., Florence, Italy, 66010W (2007). [PDF]

56. Gleeson JP and Stefanovska A

A simple mode for 1/f spectra in heart rate variability

Proc. SPIE Vol. 6602 Noise and Fluctuations in Biological, Biophysical, and Biomedical Systems, S.M. Bezrukov ed., Florence, Italy, 66020Z (2007). [PDF]

57. Gleeson JP

Infinitely fast reactions in micromixers,

Proceedings of Nanotech 2006, Boston, vol 2, 509-512 (2006). [PDF]

58. Gleeson JP

Motion in dynamical disorder - applications to 1/f noise and oscillator phase jitter,

Proc. SPIE Vol. 5845 Noise in Complex Systems and Stochastic Dynamics III, L. B. Kish, K. Lindenberg, Z. Gingl eds, 139-147 (2005). [PDF]

59. Retkute R and Gleeson JP

Dynamics of two coupled particles: comparison of Lennard-Jones and spring forces,

Proc. SPIE Vol. 5845 Noise in Complex Systems and Stochastic Dynamics III, L. B. Kish, K. Lindenberg, Z. Gingl eds, 61-71 (2005). [PDF]

60. O’Doherty F and Gleeson JP

Amplitude-phase coupling effects on the spectral lineshape of oscillators,

Proc. SPIE Vol. 5847 Noise in Communications Systems, C. N. Georghiades, L. B. White eds, 31-41 (2005).

61. Retkute R and Gleeson JP

Interaction of coupled particles based on Lennard-Jones and spring forces in Brownian ratchet devices,

Proceedings of Nanotech 2005, Anaheim, (vol. 1) 540-543 (2005). [PDF]

62. Gleeson JP

Motion in random fields: an application to stock market data,

Proc. SPIE Vol. 5471, Noise in Complex Systems and Stochastic Dynamics II, Z. Gingl ed., 612-623 (2004). [PDF]

63. Gleeson JP and Stone HA

Taylor dispersion in electroosmotic flows with random zeta potentials, Proceedings of Nanotech 2004, Boston, vol 2, 375-378 (2004). [Invited paper]. [PDF]

64. Retkute R and Gleeson JP

Stochastic analysis of particle-pair transport in Brownian ratchets,

Proceedings of Nanotech 2004, Boston, vol 3, 26-29 (2004).

65. Gleeson JP, Roche OM, West J, and Gelb A

Modelling Annular Micromixers,

Proceedings of Nanotech 2003, San Francisco, (vol. 1) 206-209 (2003).

66. Gleeson JP and West J

Magnetohydrodynamic micromixing,

Technical Proceedings of the Fifth International Conference on Modeling and Simulation of Microsystems, Puerto Rico, 318-321 (2002). [Invited paper] [PDF]

67. Flynn M and Gleeson JP

A study of the behaviour of magnetic microactuators,

Technical Proceedings of the Fifth International Conference on Modeling and Simulation of Microsystems, Puerto Rico, 322-325 (2002). [Word]

68. Gleeson JP

Electroosmotic microfluidic flows with random zeta potential,

Technical Proceedings of the Fourth International Conference on Modeling and Simulation of Microsystems, Hilton Head, SC, 190-193 (2001). [PDF]

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